ProteinPRS Polygenic Prediction of Plasma Protein Levels
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S100G

Olink Explore plasma protein · SNPBoost PRS model

Download PRS model
R2 Full Model
0.0637
pearson_coefficent
0.2267
sparsity
234
n_cis_pqtl
0
max_cis_pqtl
—

Diagnostics

PRS scatter and box plotsenlarge ⤢
PRS scatter and box plots for S100G
Genome-wide Manhattan Plotenlarge ⤢
Genome-wide Manhattan plot for S100G
Regional Manhattan Plotenlarge ⤢
Regional Manhattan plot for S100G

Model record

Field
Value
Gene
S100G
test_n
10538
sparsity
234
pearson_coefficent
0.226671432611714
SE
0.0104758379897251
P_corr
3.71700311852786e-101
R2 Covariate Model
0.0116
R2 Full Model
0.0637
P
6.14024605760911e-126
P_full
4.62634315215538e-255
n_cis_pqtl
0
max_cis_pqtl
—
rank_max_cis_pqtl
—
mean_pqtl_beta
—
mean_nopqtl_beta
0.00542788333601498
percentage_pqtl
0
percentage_nopqtl
1

cis and genome-wide metrics

Field
Value
Gene
S100G
test_n_genomewide
10538
sparsity_genomewide
234
pearson_coefficent_genomewide
0.226671432611714
SE_genomewide
0.0104758379897251
P_corr_genomewide
3.71700311852786e-101
R2_covariate_model_genomewide
0.0115757439226262
R2_full_model_genomewide
0.0637287216390793
P_genomewide
6.14024605760911e-126
P_full_genomewide
4.62634315215538e-255
n_cis_pqtl
0
max_cis_pqtl
NA
rank_max_cis_pqtl
NA
mean_pqtl_beta
NA
mean_nopqtl_beta
0.00542788333601498
percentage_pqtl
0
percentage_nopqtl
1
test_n_cis
NA
sparsity_cis
NA
pearson_coefficent_cis
NA
SE_cis
NA
P_corr_cis
NA
R2_covariate_model_cis
NA
R2_full_model_cis
NA
P_cis
NA
P_full_cis
NA