ProteinPRS Polygenic Prediction of Plasma Protein Levels
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IL11

Olink Explore plasma protein · SNPBoost PRS model

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R2 Full Model
0.0197
pearson_coefficent
0.1366
sparsity
95
n_cis_pqtl
0
max_cis_pqtl
—

Diagnostics

PRS scatter and box plotsenlarge ⤢
PRS scatter and box plots for IL11
Genome-wide Manhattan Plotenlarge ⤢
Genome-wide Manhattan plot for IL11
Regional Manhattan Plotenlarge ⤢
Regional Manhattan plot for IL11

Model record

Field
Value
Gene
IL11
test_n
10538
sparsity
95
pearson_coefficent
0.136574877074878
SE
0.00986788749967738
P_corr
3.60899381074088e-43
R2 Covariate Model
6e-04
R2 Full Model
0.0197
P
2.11472401061884e-46
P_full
1.09300350988897e-106
n_cis_pqtl
0
max_cis_pqtl
—
rank_max_cis_pqtl
—
mean_pqtl_beta
—
mean_nopqtl_beta
0.0129792900663253
percentage_pqtl
0
percentage_nopqtl
1

cis and genome-wide metrics

Field
Value
Gene
IL11
test_n_genomewide
10538
sparsity_genomewide
95
pearson_coefficent_genomewide
0.136574877074878
SE_genomewide
0.00986788749967738
P_corr_genomewide
3.60899381074088e-43
R2_covariate_model_genomewide
0.000572565759428212
R2_full_model_genomewide
0.0196971625036049
P_genomewide
2.11472401061884e-46
P_full_genomewide
1.09300350988897e-106
n_cis_pqtl
0
max_cis_pqtl
NA
rank_max_cis_pqtl
NA
mean_pqtl_beta
NA
mean_nopqtl_beta
0.0129792900663253
percentage_pqtl
0
percentage_nopqtl
1
test_n_cis
NA
sparsity_cis
NA
pearson_coefficent_cis
NA
SE_cis
NA
P_corr_cis
NA
R2_covariate_model_cis
NA
R2_full_model_cis
NA
P_cis
NA
P_full_cis
NA