ProteinPRS Polygenic Prediction of Plasma Protein Levels
← All proteins

RHOC

Olink Explore plasma protein · SNPBoost PRS model

Download PRS model
R2 Full Model
0.0183
pearson_coefficent
0.1353
sparsity
113
n_cis_pqtl
12
max_cis_pqtl
rs10745330

Diagnostics

PRS scatter and box plotsenlarge ⤢
PRS scatter and box plots for RHOC
Genome-wide Manhattan Plotenlarge ⤢
Genome-wide Manhattan plot for RHOC
Regional Manhattan Plotenlarge ⤢
Regional Manhattan plot for RHOC

Model record

Field
Value
Gene
RHOC
test_n
10538
sparsity
113
pearson_coefficent
0.13527299931207
SE
0.00985696003290932
P_corr
1.76102249712315e-42
R2 Covariate Model
-4e-04
R2 Full Model
0.0183
P
3.78803054869453e-44
P_full
3.41703809969269e-168
n_cis_pqtl
12
max_cis_pqtl
rs10745330
rank_max_cis_pqtl
2
mean_pqtl_beta
0.0143082418266069
mean_nopqtl_beta
0.0120417521668581
percentage_pqtl
0.106194690265487
percentage_nopqtl
0.893805309734513

cis and genome-wide metrics

Field
Value
Gene
RHOC
test_n_genomewide
10538
sparsity_genomewide
113
pearson_coefficent_genomewide
0.13527299931207
SE_genomewide
0.00985696003290932
P_corr_genomewide
1.76102249712315e-42
R2_covariate_model_genomewide
-0.000363645474787955
R2_full_model_genomewide
0.018278759585505
P_genomewide
3.78803054869453e-44
P_full_genomewide
3.41703809969269e-168
n_cis_pqtl
12
max_cis_pqtl
rs10745330
rank_max_cis_pqtl
2
mean_pqtl_beta
0.0143082418266069
mean_nopqtl_beta
0.0120417521668581
percentage_pqtl
0.106194690265487
percentage_nopqtl
0.893805309734513
test_n_cis
10538
sparsity_cis
12
pearson_coefficent_cis
0.0479368043829129
SE_cis
0.00993696514062583
P_corr_cis
1.42700446589536e-06
R2_covariate_model_cis
-0.000363645474787955
R2_full_model_cis
0.00176566917466203
P_cis
6.13274743114476e-08
P_full_cis
8.13036442733536e-35