ProteinPRS Polygenic Prediction of Plasma Protein Levels
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CRLF1

Olink Explore plasma protein · SNPBoost PRS model

Download PRS model
R2 Full Model
0.1911
pearson_coefficent
0.3966
sparsity
1465
n_cis_pqtl
31
max_cis_pqtl
rs143345899

Diagnostics

PRS scatter and box plotsenlarge ⤢
PRS scatter and box plots for CRLF1
Genome-wide Manhattan Plotenlarge ⤢
Genome-wide Manhattan plot for CRLF1
Regional Manhattan Plotenlarge ⤢
Regional Manhattan plot for CRLF1

Model record

Field
Value
Gene
CRLF1
test_n
10538
sparsity
1465
pearson_coefficent
0.396608001736041
SE
0.00905267894637229
P_corr
0
R2 Covariate Model
0.0439
R2 Full Model
0.1911
P
0
P_full
0
n_cis_pqtl
31
max_cis_pqtl
rs143345899
rank_max_cis_pqtl
1
mean_pqtl_beta
0.00464564448563686
mean_nopqtl_beta
0.00284352044641476
percentage_pqtl
0.021160409556314
percentage_nopqtl
0.978839590443686

cis and genome-wide metrics

Field
Value
Gene
CRLF1
test_n_genomewide
10538
sparsity_genomewide
1465
pearson_coefficent_genomewide
0.396608001736041
SE_genomewide
0.00905267894637229
P_corr_genomewide
0
R2_covariate_model_genomewide
0.0439311108450841
R2_full_model_genomewide
0.191101905059187
P_genomewide
0
P_full_genomewide
0
n_cis_pqtl
31
max_cis_pqtl
rs143345899
rank_max_cis_pqtl
1
mean_pqtl_beta
0.00464564448563686
mean_nopqtl_beta
0.00284352044641476
percentage_pqtl
0.021160409556314
percentage_nopqtl
0.978839590443686
test_n_cis
10538
sparsity_cis
31
pearson_coefficent_cis
0.0951154301660364
SE_cis
0.00981672494202671
P_corr_cis
4.16894100379252e-22
R2_covariate_model_cis
0.0439311108450841
R2_full_model_cis
0.0521299146863251
P_cis
8.59318137008327e-125
P_full_cis
1.68630549782543e-52